This list contains recent publications where the FinTomo-RI infrastructure has had a role. The list might not be exhaustive, and if you spot an error, please report it to coordinator@fintomo-ri.fi.
2024
Hyväluoma, J., Niemi, P., Kinnunen, S., Brobbey, K., Miettinen, A., Keskinen, R., Soinne, H. (2024). Comparing structural soil properties of boreal clay fields under contrasting soil management. Soil Use and Management, 40(2), Article e13040. https://doi.org/10.1111/sum.13040
Ollonen, J., Khannoon, E. R., Macri, S., Vergilov, V., Kuurne, J., Saarikivi, J., Soukainen, A., Aalto, I-M., Werneburg, I., Diaz Jr, R. E., Di-Poi, N. (2024). Dynamic evolutionary interplay between ontogenetic skull patterning and whole-head integration, Nature Ecology & Evolution, 21, https://doi.org/10.1038/s41559-023-02295-3
Soinne, H., Hyyrynen, M., Jokubė, M., Keskinen, R., Hyväluoma, J., Pihlainen, S., Hyytiäinen, K., Miettinen, A., Rasa, K., Lemola, R., Virtanen, E., Heinonsalo, J., Heikkinen, J. (2024). High organic carbon content constricts the potential for stable organic carbon accrual in mineral agricultural soils in Finland. Journal of Environmental Management, 352, Article 119945. https://doi.org/10.1016/j.jenvman.2023.119945
2023
Ang, J. W. L., Bongrand, A., Duval, S., Donnard, J., Parkkonen, J., Utsunomiya, S., Koivula, R., Siitari-Kauppi, M., Law, G. T. W. (2023). Improved Radio-Cesium Detection Using Quantitative Real-Time Autoradiography. ACS Omega, 8(25), https://doi.org/10.1021/acsomega.3c00728
Harjupatana, T. (2023). Monitoring water transport and deformation in swelling materials using X-ray imaging and tomography [Doctoral dissertation]. University of Jyväskylä. JYU dissertations, 688. http://urn.fi/URN:ISBN:978-951-39-9718-2
Hyväluoma Jari, Miettinen, Arttu, Keskinen, Riikka, Rasa, Kimmo, Lindberg, Henrik. (2023). Structural and chemical changes in pyrogenic organic matter aged in a boreal forest soil. Pedosphere, 33(3), https://doi.org/10.1016/j.pedsph.2022.06.058
Iso-Mustajärvi, M., Silvast, T., Heikka, T., Tervaniemi, J., Calixto, R., Linder, P.H., Dietz, A. (2023). Trauma After Cochlear Implantation: The Accuracy of Micro-Computed Tomography and Cone-Beam Fusion Computed Tomography Compared With Histology in Human Temporal Bones. Otology & Neurotology 44(4): 339-345. https://doi.org/10.1097/mao.0000000000003835
Macri, S., Aalto, I-M., Allemand, R., Di-Poi, N. (2023). Reconstructing the origin and early evolution of the snake brain, Science Advances, 9(39), https://doi.org/10.1126/sciadv.adi6888
Mattos, B. D., Jäntti, N., Khakalo, S., Zhu, Y., Miettinen, A., Parkkonen, J., Khakalo, A., Rojas, O. J., Ago, M. (2023). Black Bioinks from Superstructured Carbonized Lignin Particles. Advanced Functional Materials, 33(45), https://doi.org/10.1002/adfm.202304867
Ramos-Diaz, J. M., Oksanen, S., Kantanen, K. A., Edelmann, M., Suhonen, H., Sontag-Strohm, T., Piironen, V., Jouppila, K. (2023). Characterization of texturized meat analogues containing native lupin flour and lupin protein concentrate/isolate, Heliyon 9(10), https://doi.org/10.1016/j.heliyon.2023.e20503
Soini, A-J., Kukkonen, I., Suhonen, H., Lukić, B., Kohout, T., Luttinen, A. (2023). Investigation of the porosity of L/LL4 ordinary chondrite Bjurböle using synchrotron radiation microtomography and scanning electron microscopy: Implications for parent body evolution, Physics of the Earth and Planetary Interiors 343, https://doi.org/10.1016/j.pepi.2023.107087
Turunen, M., Urbano-Tenorio, F., Rasa, K., Hyväluoma, J., Rytkönen, P., Kaseva, J., Beuker, E., Suhonen, H., Jyske, T., (2023). How clonal differences and within-tree heterogeneity affect pore properties of hybrid aspen wood and biochar?, Biomass conversion and biorefinery 13(5), https://doi.org/10.1007/s13399-021-01464-3
Viljanen, M., Help, H., Suhonen, H., Svedström, K. (2023). Combined X-ray diffraction tomography imaging of tension and opposite wood tissues in young hybrid aspen saplings, Wood Science and Technology 57(4), https://doi.org/10.1007/s00226-023-01477-3
Väänänen, V., Christensen, M. M., Suhonen, H., Jernvall, J. (2023). Gene expression detection in developing mouse tissue using in situ hybridization and µCT imaging, Proceedings of the National Academy of Sciences of the United States of America 120(24), https://doi.org/10.1073/pnas.2301876120
Zhao, B., Shi, X., Khakalo, S., Meng, Y., Miettinen, A., Turpeinen, T., Mi, S., Sun, Z., Khakalo, A., Rojas, O. J., Mattos, B. D. (2023). Wood-based superblack. Nature Communications, 14, https://doi.org/10.1038/s41467-023-43594-4
2022
Harjupatana, T., Miettinen, A., Kataja, M. (2022). A method for measuring wetting and swelling of bentonite using X-ray imaging. Applied Clay Science, 221, https://doi.org/10.1016/j.clay.2022.106485
Kantanen, K. A., Oksanen, A., Edelmann, M., Suhonen, H., Sontag-Strohm, T., Piironen, V., Ramos-Diaz, J. M., Jouppila, K. (2022). Physical properties of extrudates with fibrous structures made of faba bean protein ingredients using high moisture extrusion, Foods 11, 9, 17, https://doi.org/10.3390/foods11091280
Karakoç, A., Miettinen, A., Sözümert, E., Evans, L., Yiğitler, H., Bostanci, B., Taciroğlu, E., Jäntti, R. (2022). Microstructural evaluation and recommendations for face masks in community use to reduce the transmission of respiratory infectious diseases. Computer Methods and Programs in Biomedicine, 226, https://doi.org/10.1016/j.cmpb.2022.107154
Ramos-Diaz, J. M., Kantanen, K. A., Edelmann, M., Suhonen, H., Sontag-Strohm, T., Jouppila, K., Piironen, V. (2022). Fibrous meat analogues containing oat fiber concentrate and pea protein isolate: Mechanical and physicochemical characterization, Innovative Food Science and Emerging Technologies 77(11), https://doi.org/10.1016/j.ifset.2022.102954
Suomela, J., Suhonen, H., Räisänen, R., Wright, K. M. (2022). Identifying Late Iron Age textile plant fibre materials with microscopy and X-ray methods — a study on finds from Ravattula Ristimäki (Kaarina, Finland), Archaeological and Anthropological Sciences 14, 3, 15, https://doi.org/10.1007/s12520-022-01507-4
2021
Anthony, N., Frostevarg, J., Suhonen, H., Granvik, M. (2021). Laboratory experiments with a laser-based attachment mechanism for spacecraft at small bodies, Acta Astronautica 189, https://doi.org/10.1016/j.actaastro.2021.08.028
Eriksson, E., Björkenheim, R., Strömberg, G., Ainola, M., Uppstu, P., Aalto-Setälä, L., Leino, V-M., Hupa, L., Pajarinen, J., Lindfors, N. C. (2021). S53P4 bioactive glass scaffolds induce BMP expression and integrative bone formation in a critical-sized diaphysis defect treated with a single-staged induced membrane technique, Acta Biomaterialia 126, https://doi.org/10.1016/j.actbio.2021.03.035
Erkkilä, A-L., Leppänen, T., Virkajärvi, J., Parkkonen, J., Turunen, L., Tuovinen, T. (2021). Quasi-brittle porous material: Simulated effect of stochastic air void structure on compressive strength. Cement and Concrete Research 139, https://doi.org/10.1016/j.cemconres.2020.106255
Huang, L., Riihioja, I., Tanska, P., Ojanen, S., Palosaari, S., Kröger, H., Saarakkala, S., Herzog, W., Korhonen, RK., Finnilä, MAJ. (2021). Early changes in osteochondral tissues in a rabbit model of post-traumatic osteoarthritis. Journal of Orthopaedic Research. https://doi.org/10.1002/jor.25009
Karakoç, A., Miettinen, A., Virkajӓrvi, J., Joffe, R. (2021). Effective elastic properties of biocomposites using 3D computational homogenization and X-ray microcomputed tomography, Composite Structures 273, https://doi.org/10.1016/j.compstruct.2021.114302
Karjalainen, VP., Kestilä, I., Finnilä, MA., Folkeson, E., Turkiewicz, A., Önnerfjord, P., Hughes, V., Tjörnstrand, J., Englund, M., Saarakkala, S. (2021). Quantitative three-dimensional collagen orientation analysis of human meniscus posterior horn in health and osteoarthritis using micro-computed tomography. Osteoarthritis Cartilage 29(5), https://doi.org/10.1016/j.joca.2021.01.009
Koivunen, J., Tu, H., Kemppainen, A., Anbazhagan, P., Finnilä, MA., Saarakkala, S., Käypylä, J., Lu, N., Heikkinen, A., Juffer, AH., Heino, J., Gullberg, D., Pihlajaniemi, T. (2021). Integrin α11β1 is a receptor for collagen XIII. Cell Tissue Research 383(3)m https://doi.org/10.1007/s00441-020-03300-y
Kuusela, P., Pour-Ghaz, M., Pini, R., Voss, A., Seppänen, A. (2021). Imaging of reactive transport in fractured cement-based materials with X-ray CT, Cement and Concrete Composites, 124, https://doi.org/10.1016/j.cemconcomp.2021.104211
Lafuma, F., Corfe, I.J., Clavel, J. and Di-Poi, N. (2021). Multiple evolutionary origins and losses of tooth complexity in squamates. Nature Communications 12, https://doi.org/10.1038/s41467-021-26285-w
Lauri, J., Haavisto, S., Salmela, J., Miettinen, A., Fabritius, T., Koponen, A.I. (2021). Online measurement of floc size, viscosity, and consistency of cellulose microfibril suspensions with optical coherence tomography. Cellulose, 28(6), https://doi.org/10.1007/s10570-021-03745-6
Lemougna, PN., Yliniemi, J., Adediran, A., Luukkonen, T., Tanskanen, P., Finnilä, M., Illikainen, M. (2021). Synthesis and characterization of porous ceramics from spodumene tailings and waste glass wool. Ceramics International. https://doi.org/10.1016/j.ceramint.2021.08.231
Mattsson, A., Joelsson, T., Miettinen, A., Ketoja, J.A., Pettersson, G., Engstrand, P. (2021). Lignin Inter-Diffusion Underlying Improved Mechanical Performance of Hot-Pressed Paper Webs, Polymers 13(15), https://doi.org/10.3390/polym13152485
Newham, E., Gill, P., Corfe, I.J., Robson-Brown, K, Schneider, P. (2021). A robust, automated cementochronology approach for imaging and counting cementum increments using X-ray computed tomography. Plos One. https://doi.org/10.1101/2021.03.25.436951
Newham, E.N., Robson-Brown, K., Corfe, I.J., Gill, P.G., Brewer, P., Bayle, P., Schneider, P. (2021). Non-invasive 3D methods for the study of dental cementum. Peer reviewed book chapter in: New studies in cementochronology (ed. Stephan Naji), Cambridge University Press
Rasa, K., Vihera-Aarnio, A., Rytkonen, P., Hyvaluoma, J., Kaseva, J., Suhonen, H., Jyske, T. (2021). Quantitative analysis of feedstock structural properties can help to produce willow biochar with homogenous pore system, Industrial Crops and Products 166(9), https://doi.org/10.1016/j.indcrop.2021.113475
Romell, J., Jie, V.W., Miettinen, A., Baird, E., Hertz, H.M. (2021). Laboratory phase-contrast nanotomography of unstained Bombus terrestris compound eyes, Journal of Microscopy 283(1), https://doi.org/10.1111/jmi.13005
Rytky, SJO., Huang, L., Tanska, P., Tiulpin, A., PAniflov, E., Herzog, W., Korhonen, RK., Saarakkala, S., Finnilä, MAJ. (2021). Automated analysis of rabbit knee calcified cartilage morphology using micro-computed tomography and deep learning. Journal of Anatomy 239(2), https://doi.org/10.1111/joa.13435
Salomies, L., Eymann, J., Ollonen, J. S. O., Khan, I., Di-Poi, N. (2021). The developmental origins of heterodonty and acrodonty as revealed by reptile dentitions, Science Advances 7(51), https://doi.org/10.1126/sciadv.abj7912
Wälchli, T., Bisschop, J., Miettinen, A., Ulmann-Schuler, A., Hintermüller, C., Meyer, E.P., Krucker, T., Wälchli, R., Monnier, P.P., Carmeliet, P., Vogel, J., Stampanoni, M. (2021). Hierarchical imaging and computational analysis of three-dimensional vascular network architecture in the entire postnatal and adult mouse brain, Nature Protocols, https://doi.org/10.1038/s41596-021-00587-1